STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGB17434.1PFAM: Protein of unknown function (DUF354). (347 aa)    
Predicted Functional Partners:
AGB17438.1
PFAM: Glycosyl transferase family 2.
 
  
 0.809
AGB17435.1
Putative ATP-grasp enzyme; PFAM: ATP-grasp domain.
       0.797
AGB17436.1
Acyltransferase family protein; PFAM: Bacterial transferase hexapeptide (three repeats).
  
    0.792
AGB15263.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1.
 
     0.635
AGB15245.1
Hypothetical protein.
 
     0.632
AGB14874.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1.
 
     0.610
AGB16235.1
Hypothetical protein.
 
     0.585
AGB15267.1
Hypothetical protein.
 
     0.583
AGB17437.1
Putative xylanase/chitin deacetylase; PFAM: Polysaccharide deacetylase.
       0.581
AGB16219.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1.
 
     0.575
Your Current Organism:
Halovivax ruber
NCBI taxonomy Id: 797302
Other names: H. ruber XH-70, Halovivax ruber JCM 13892, Halovivax ruber XH-70, Halovivax ruber str. XH-70, Halovivax ruber strain XH-70
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.