Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGB17438.1PFAM: Glycosyl transferase family 2. (351 aa)    
Predicted Functional Partners:
AGB17437.1
Putative xylanase/chitin deacetylase; PFAM: Polysaccharide deacetylase.
 
  
 0.839
AGB17434.1
PFAM: Protein of unknown function (DUF354).
 
  
 0.809
AGB17439.1
Nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
  
 0.756
AGB15482.1
PFAM: Glycosyl transferase family 2.
  
   
 0.654
AGB17436.1
Acyltransferase family protein; PFAM: Bacterial transferase hexapeptide (three repeats).
  
  
 0.604
AGB17435.1
Putative ATP-grasp enzyme; PFAM: ATP-grasp domain.
       0.579
AGB16194.1
PFAM: Protein of unknown function (DUF354).
 
  
 0.561
AGB15246.1
Hypothetical protein.
 
  
 0.519
AGB15608.1
Putative membrane protein, required for N-linked glycosylation; PFAM: Oligosaccharyl transferase STT3 subunit.
 
 
 0.519
AGB17441.1
Nucleoside-diphosphate-sugar pyrophosphorylase family protein; PFAM: Nucleotidyl transferase.
 
 
 0.517
Your Current Organism:
Halovivax ruber
NCBI taxonomy Id: 797302
Other names: H. ruber XH-70, Halovivax ruber JCM 13892, Halovivax ruber XH-70, Halovivax ruber str. XH-70, Halovivax ruber strain XH-70
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