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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGB17439.1Nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. (439 aa)    
Predicted Functional Partners:
AGB17437.1
Putative xylanase/chitin deacetylase; PFAM: Polysaccharide deacetylase.
 
    0.734
AGB17438.1
PFAM: Glycosyl transferase family 2.
  
  
 0.721
AGB15628.1
PFAM: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase.
 
  
 0.708
AGB15244.1
PFAM: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase.
 
  
 0.699
AGB17436.1
Acyltransferase family protein; PFAM: Bacterial transferase hexapeptide (three repeats).
     
 0.539
AGB17433.1
UDP-glucose 4-epimerase; PFAM: NAD dependent epimerase/dehydratase family.
 
  
 0.530
AGB17434.1
PFAM: Protein of unknown function (DUF354).
     
 0.516
AGB17435.1
Putative ATP-grasp enzyme; PFAM: ATP-grasp domain.
       0.516
glmS-4
Glucosamine--fructose-6-phosphate aminotransferase, isomerizing; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
  
    0.489
AGB15630.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1.
 
  
 0.482
Your Current Organism:
Halovivax ruber
NCBI taxonomy Id: 797302
Other names: H. ruber XH-70, Halovivax ruber JCM 13892, Halovivax ruber XH-70, Halovivax ruber str. XH-70, Halovivax ruber strain XH-70
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