STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGB17443.1PFAM: Protein of unknown function DUF58. (522 aa)    
Predicted Functional Partners:
AGB17288.1
Transglutaminase-like enzyme, predicted cysteine protease; PFAM: Transglutaminase-like superfamily.
 
  
 0.764
AGB17445.1
Hypothetical protein.
       0.727
AGB17444.1
Hypothetical protein.
       0.648
AGB17447.1
Hypothetical protein.
 
    0.623
AGB17446.1
PFAM: ATPase family associated with various cellular activities (AAA).
 
  
 0.585
AGB17442.1
Hypothetical protein.
       0.566
AGB17290.1
PFAM: ATPase family associated with various cellular activities (AAA).
 
  
 0.558
AGB16485.1
PFAM: ATPase family associated with various cellular activities (AAA).
 
  
 0.541
AGB16355.1
PFAM: Protein of unknown function DUF58.
 
     0.488
AGB17316.1
Arylsulfatase A family protein; PFAM: Sulfatase.
 
     0.425
Your Current Organism:
Halovivax ruber
NCBI taxonomy Id: 797302
Other names: H. ruber XH-70, Halovivax ruber JCM 13892, Halovivax ruber XH-70, Halovivax ruber str. XH-70, Halovivax ruber strain XH-70
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.