STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGB17503.1NADH dehydrogenase, FAD-containing subunit; PFAM: Pyridine nucleotide-disulphide oxidoreductase. (379 aa)    
Predicted Functional Partners:
AGB17504.1
Putative redox protein, regulator of disulfide bond formation; PFAM: SirA-like protein.
 
   
 0.958
AGB17502.1
PFAM: Protein of unknown function (DUF1641).
  
    0.951
AGB14977.1
glycine/D-amino acid oxidase, deaminating; PFAM: FAD dependent oxidoreductase; Rieske [2Fe-2S] domain.
  
 
 0.910
AGB16072.1
Cysteine synthase; PFAM: Pyridoxal-phosphate dependent enzyme.
    
 0.910
AGB17526.1
Hypothetical protein.
 
    0.663
AGB15021.1
glycine/D-amino acid oxidase, deaminating; PFAM: FAD dependent oxidoreductase.
  
 
 0.552
AGB15843.1
glycine/D-amino acid oxidase, deaminating; PFAM: FAD dependent oxidoreductase.
  
 
 0.552
AGB15674.1
Putative amidohydrolase; PFAM: Carbon-nitrogen hydrolase.
   
  
 0.497
rps5
Ribosomal protein S5/S2; With S4 and S12 plays an important role in translational accuracy.
  
   0.481
AGB16577.1
Ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase; PFAM: Rieske [2Fe-2S] domain.
  
 
 0.458
Your Current Organism:
Halovivax ruber
NCBI taxonomy Id: 797302
Other names: H. ruber XH-70, Halovivax ruber JCM 13892, Halovivax ruber XH-70, Halovivax ruber str. XH-70, Halovivax ruber strain XH-70
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.