STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGB17578.1Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase; PFAM: Phospholipase D Active site motif. (292 aa)    
Predicted Functional Partners:
AGB14659.1
PFAM: GTPase of unknown function; TIGRFAM: small GTP-binding protein domain.
   
 0.784
AGB17580.1
DNA/RNA helicase, superfamily II; PFAM: Helicase conserved C-terminal domain.
 
     0.755
AGB17579.1
PFAM: Domain of unknown function (DUF1998); manually curated.
 
     0.753
AGB17577.1
Putative low-complexity protein; PFAM: Pentapeptide repeats (8 copies); Ion channel.
  
  
 0.585
AGB17581.1
Hypothetical protein.
       0.539
AGB17582.1
Hypothetical protein.
       0.539
AGB17583.1
Hypothetical protein.
       0.539
AGB17584.1
Hypothetical protein.
       0.539
AGB14706.1
Ankyrin repeat-containing protein; PFAM: Ankyrin repeat.
  
 0.496
AGB16489.1
PFAM: Protein kinase domain; FHA domain.
  
 0.450
Your Current Organism:
Halovivax ruber
NCBI taxonomy Id: 797302
Other names: H. ruber XH-70, Halovivax ruber JCM 13892, Halovivax ruber XH-70, Halovivax ruber str. XH-70, Halovivax ruber strain XH-70
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.