Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGB17592.1Putative nucleic acid-binding protein, contains PIN domain; PFAM: PIN domain. (149 aa)    
Predicted Functional Partners:
AGB17593.1
Hypothetical protein.
       0.773
AGB15884.1
PFAM: Bacterial protein of unknown function (DUF839).
  
     0.642
AGB17591.1
Hypothetical protein.
       0.536
AGB15233.1
Hypothetical protein.
  
     0.535
AGB16281.1
Putative domain HDIG-containing protein; PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG.
  
     0.532
AGB16655.1
ABC-type branched-chain amino acid transport system, periplasmic component; PFAM: Receptor family ligand binding region.
  
     0.499
AGB14866.1
3-hydroxy-3-methylglutaryl CoA synthase; PFAM: Rubredoxin-like zinc ribbon domain (DUF35_N); DUF35 OB-fold domain.
  
     0.477
AGB17594.1
Hypothetical protein.
       0.474
AGB14885.1
PFAM: HTH DNA binding domain.
  
     0.443
AGB16193.1
Site-specific recombinase XerD.
  
     0.437
Your Current Organism:
Halovivax ruber
NCBI taxonomy Id: 797302
Other names: H. ruber XH-70, Halovivax ruber JCM 13892, Halovivax ruber XH-70, Halovivax ruber str. XH-70, Halovivax ruber strain XH-70
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