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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGB17668.1Putative transcriptional regulator, contains C-terminal CBS domains; PFAM: CBS domain. (283 aa)    
Predicted Functional Partners:
AGB17669.1
glycyl-tRNA synthetase, dimeric type; PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: glycyl-tRNA synthetase, dimeric type.
     
 0.812
AGB16725.1
Putative transcriptional regulator, contains C-terminal CBS domains; PFAM: CBS domain.
 
    0.749
AGB16473.1
PFAM: Uncharacterised protein family (UPF0179); Belongs to the UPF0179 family.
  
    0.696
AGB15512.1
CBS domain-containing protein; PFAM: CBS domain.
 
   
0.684
AGB17695.1
Putative regulator of amino acid metabolism, contains ACT domain.
  
   
 0.674
AGB15438.1
Putative metal-dependent protease of the PAD1/JAB1 superfamily.
  
 
 0.666
AGB17076.1
Prefoldin alpha subunit; PFAM: PUA domain; TIGRFAM: uncharacterized domain 2.
  
     0.645
tiaS
Putative DNA-binding protein containing a Zn-ribbon domain; ATP-dependent agmatine transferase that catalyzes the formation of 2-agmatinylcytidine (agm2C) at the wobble position (C34) of tRNA(Ile2), converting the codon specificity from AUG to AUA.
  
     0.639
AGB17670.1
Dolichol kinase.
 
     0.629
AGB15279.1
PFAM: AICARFT/IMPCHase bienzyme; Formyl transferase; TIGRFAM: phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent.
  
  
 0.613
Your Current Organism:
Halovivax ruber
NCBI taxonomy Id: 797302
Other names: H. ruber XH-70, Halovivax ruber JCM 13892, Halovivax ruber XH-70, Halovivax ruber str. XH-70, Halovivax ruber strain XH-70
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