STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGB30013.1Protein-tyrosine-phosphatase; PFAM: Low molecular weight phosphotyrosine protein phosphatase. (147 aa)    
Predicted Functional Partners:
AGB30012.1
Arsenical-resistance protein; PFAM: Sodium Bile acid symporter family; TIGRFAM: arsenical-resistance protein; manually curated.
 
  
 0.950
AGB30011.1
Putative transcriptional regulator.
 
  
 0.849
AGB30722.1
Arsenite efflux pump ACR3-like permease; PFAM: Sodium Bile acid symporter family.
 
  
 0.690
AGB33194.1
ABC-type multidrug transport system, ATPase and permease component; PFAM: ABC transporter transmembrane region; ABC transporter.
 
 
 
 0.665
AGB31841.1
Putative transcriptional regulator; PFAM: Bacterial regulatory protein, arsR family.
 
  
 0.579
AGB30010.1
Putative translation initiation inhibitor, yjgF family; PFAM: Endoribonuclease L-PSP.
  
    0.563
engB
Small GTP-binding protein domain protein; Necessary for normal cell division and for the maintenance of normal septation.
  
    0.548
truA
Pseudouridylate synthase; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs; Belongs to the tRNA pseudouridine synthase TruA family.
   
 
 0.540
AGB31797.1
Di-/tricarboxylate transporter; PFAM: Sodium:sulfate symporter transmembrane region.
 
  
 0.503
infB
Translation initiation factor aIF-2/yIF-2; Function in general translation initiation by promoting the binding of the formylmethionine-tRNA to ribosomes. Seems to function along with eIF-2.
   
   0.493
Your Current Organism:
Natrinema pellirubrum
NCBI taxonomy Id: 797303
Other names: N. pellirubrum DSM 15624, Natrinema pellirubrum DSM 15624, Natrinema pellirubrum JCM 10476, Natrinema pellirubrum NCIMB 786, Natrinema pellirubrum str. DSM 15624, Natrinema pellirubrum strain DSM 15624
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.