STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGB30119.1PFAM: Na+/H+ antiporter family; TIGRFAM: Na+/H+ antiporter NhaC. (486 aa)    
Predicted Functional Partners:
AGB31351.1
PFAM: Domain related to MnhB subunit of Na+/H+ antiporter.
      
 0.612
AGB30515.1
PFAM: Sodium:solute symporter family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
  
 0.571
AGB30120.1
Serine/threonine protein kinase involved in cell cycle control; PFAM: RIO1 family.
  
    0.569
AGB30118.1
Ferredoxin; PFAM: 2Fe-2S iron-sulfur cluster binding domain.
       0.506
AGB31473.1
PFAM: Na+/H+ antiporter family.
  
   
 0.469
AGB30121.1
TIGRFAM: phosphoesterase, MJ0936 family.
     
 0.440
Your Current Organism:
Natrinema pellirubrum
NCBI taxonomy Id: 797303
Other names: N. pellirubrum DSM 15624, Natrinema pellirubrum DSM 15624, Natrinema pellirubrum JCM 10476, Natrinema pellirubrum NCIMB 786, Natrinema pellirubrum str. DSM 15624, Natrinema pellirubrum strain DSM 15624
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.