STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AGB30130.1K+ transport system, NAD-binding component; PFAM: TrkA-N domain; TrkA-C domain. (227 aa)    
Predicted Functional Partners:
AGB30129.1
Trk-type K+ transport system, membrane component; PFAM: Cation transport protein.
 
 
 0.955
AGB30557.1
Trk-type K+ transport system, membrane component; PFAM: Cation transport protein.
 
 
 0.808
AGB31587.1
Trk-type K+ transport system, membrane component; PFAM: Cation transport protein.
 
 
 0.807
AGB30128.1
Hypothetical protein.
       0.786
AGB31921.1
Trk-type K+ transport system, membrane component; PFAM: Cation transport protein.
 
 
 0.768
AGB31584.1
Trk-type K+ transport system, membrane component; PFAM: Cation transport protein.
 
 
 0.767
AGB31280.1
K+ transport system, NAD-binding component; PFAM: TrkA-N domain; TrkA-C domain.
  
     0.652
aroA-2
Putative phospho-2-dehydro-3-deoxyheptonate aldolase; Catalyzes a transaldol reaction between 6-deoxy-5- ketofructose 1-phosphate (DKFP) and L-aspartate semialdehyde (ASA) with an elimination of hydroxypyruvaldehyde phosphate to yield 2-amino-3,7- dideoxy-D-threo-hept-6-ulosonate (ADH). Plays a key role in an alternative pathway of the biosynthesis of 3-dehydroquinate (DHQ), which is involved in the canonical pathway for the biosynthesis of aromatic amino acids.
   
    0.520
AGB30373.1
Molybdopterin converting factor, large subunit; PFAM: MoaE protein.
  
    0.509
hemD
PFAM: Uroporphyrinogen-III synthase HemD.
  
    0.498
Your Current Organism:
Natrinema pellirubrum
NCBI taxonomy Id: 797303
Other names: N. pellirubrum DSM 15624, Natrinema pellirubrum DSM 15624, Natrinema pellirubrum JCM 10476, Natrinema pellirubrum NCIMB 786, Natrinema pellirubrum str. DSM 15624, Natrinema pellirubrum strain DSM 15624
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.