STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
AGB30237.1Putative flavin-nucleotide-binding protein; PFAM: Pyridoxamine 5'-phosphate oxidase. (154 aa)    
Predicted Functional Partners:
AGB30238.1
Choline dehydrogenase-like flavoprotein; PFAM: GMC oxidoreductase.
       0.499
AGB31183.1
Putative ATPase; PFAM: Domain of unknown function DUF87.
  
     0.471
AGB32372.1
PFAM: Polyketide cyclase / dehydrase and lipid transport.
  
     0.449
AGB30745.1
Hypothetical protein.
  
     0.447
AGB30921.1
Hypothetical protein.
  
     0.432
AGB32683.1
Phosphate uptake regulator; PFAM: PhoU domain; SpoVT / AbrB like domain.
  
     0.430
AGB32886.1
Arabinose efflux permease family protein; PFAM: Major Facilitator Superfamily.
  
     0.428
AGB33234.1
Flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase; PFAM: Luciferase-like monooxygenase.
  
     0.407
AGB33352.1
PFAM: HTH DNA binding domain.
  
     0.406
AGB31164.1
Orc1/cdc6 family replication initiation protein; Involved in regulation of DNA replication.
  
     0.405
Your Current Organism:
Natrinema pellirubrum
NCBI taxonomy Id: 797303
Other names: N. pellirubrum DSM 15624, Natrinema pellirubrum DSM 15624, Natrinema pellirubrum JCM 10476, Natrinema pellirubrum NCIMB 786, Natrinema pellirubrum str. DSM 15624, Natrinema pellirubrum strain DSM 15624
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