STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AGB30392.1Enolase superfamily enzyme related to L-alanine-DL-glutamate epimerase. (362 aa)    
Predicted Functional Partners:
AGB30897.1
PFAM: Ferritin-like domain.
  
     0.654
AGB30391.1
Putative unusual protein kinase; PFAM: ABC1 family.
       0.644
AGB33529.1
Hypothetical protein.
  
     0.582
AGB30390.1
Molecular chaperone (small heat shock protein); PFAM: Hsp20/alpha crystallin family; Belongs to the small heat shock protein (HSP20) family.
 
     0.570
AGB31879.1
Putative metal-dependent phosphoesterase, PHP family.
  
     0.517
AGB32063.1
PFAM: Protein of unknown function (DUF447).
  
     0.478
AGB33226.1
Lipoate-protein ligase A.
  
     0.443
eif5a
Translation initiation factor eIF-5A; Functions by promoting the formation of the first peptide bond; Belongs to the eIF-5A family.
       0.430
AGB30394.1
Agmatinase; PFAM: Arginase family; TIGRFAM: agmatinase; Belongs to the arginase family.
       0.430
AGB30652.1
Lactoylglutathione lyase-like lyase.
  
     0.423
Your Current Organism:
Natrinema pellirubrum
NCBI taxonomy Id: 797303
Other names: N. pellirubrum DSM 15624, Natrinema pellirubrum DSM 15624, Natrinema pellirubrum JCM 10476, Natrinema pellirubrum NCIMB 786, Natrinema pellirubrum str. DSM 15624, Natrinema pellirubrum strain DSM 15624
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