STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AGB30669.1PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase; PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase. (671 aa)    
Predicted Functional Partners:
AGB30672.1
PFAM: Reversibly glycosylated polypeptide.
 
     0.950
AGB30671.1
ABC-type Fe3+ transport system, periplasmic component; PFAM: Bacterial extracellular solute-binding protein.
 
     0.923
AGB30670.1
ABC-type Fe3+ transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component.
 
     0.919
AGB30673.1
Putative integral membrane protein; PFAM: Uncharacterised protein family (UPF0104); TIGRFAM: conserved hypothetical protein.
 
     0.826
AGB33425.1
ABC-type Fe3+-hydroxamate transport system, periplasmic component; PFAM: Periplasmic binding protein.
  
     0.685
AGB30323.1
SAM-dependent methyltransferase, tRNA(uracil-5)-methyltransferase; PFAM: TRAM domain.
  
     0.639
AGB31940.1
Acetyltransferase, N-acetylglutamate synthase; PFAM: Acetyltransferase (GNAT) family.
  
     0.608
AGB33403.1
Hypothetical protein.
  
     0.603
AGB33534.1
DNA helicase, Rad3; PFAM: DEAD_2.
  
     0.583
AGB31796.1
PFAM: HTH DNA binding domain.
  
     0.559
Your Current Organism:
Natrinema pellirubrum
NCBI taxonomy Id: 797303
Other names: N. pellirubrum DSM 15624, Natrinema pellirubrum DSM 15624, Natrinema pellirubrum JCM 10476, Natrinema pellirubrum NCIMB 786, Natrinema pellirubrum str. DSM 15624, Natrinema pellirubrum strain DSM 15624
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.