STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGB30672.1PFAM: Reversibly glycosylated polypeptide. (393 aa)    
Predicted Functional Partners:
AGB30673.1
Putative integral membrane protein; PFAM: Uncharacterised protein family (UPF0104); TIGRFAM: conserved hypothetical protein.
 
     0.959
AGB30669.1
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase; PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase.
 
     0.950
AGB30670.1
ABC-type Fe3+ transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component.
       0.874
AGB30671.1
ABC-type Fe3+ transport system, periplasmic component; PFAM: Bacterial extracellular solute-binding protein.
       0.874
AGB29984.1
Glutaredoxin-like protein; PFAM: Glutaredoxin; manually curated.
  
     0.631
AGB30674.1
PFAM: NAD dependent epimerase/dehydratase family.
 
     0.628
AGB32569.1
Plastocyanin; PFAM: Copper binding proteins, plastocyanin/azurin family.
  
     0.597
AGB32002.1
PFAM: Uncharacterised protein family (UPF0104); TIGRFAM: conserved hypothetical protein.
 
     0.564
AGB33425.1
ABC-type Fe3+-hydroxamate transport system, periplasmic component; PFAM: Periplasmic binding protein.
  
     0.549
AGB33534.1
DNA helicase, Rad3; PFAM: DEAD_2.
  
     0.547
Your Current Organism:
Natrinema pellirubrum
NCBI taxonomy Id: 797303
Other names: N. pellirubrum DSM 15624, Natrinema pellirubrum DSM 15624, Natrinema pellirubrum JCM 10476, Natrinema pellirubrum NCIMB 786, Natrinema pellirubrum str. DSM 15624, Natrinema pellirubrum strain DSM 15624
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.