STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGB30683.1Putative deacylase; PFAM: Succinylglutamate desuccinylase / Aspartoacylase family. (319 aa)    
Predicted Functional Partners:
AGB30682.1
Threonine synthase; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine synthase.
       0.919
AGB30681.1
ADP-ribose pyrophosphatase; PFAM: NUDIX domain.
       0.680
AGB33407.1
Glutathione synthase/ribosomal protein S6 modification enzyme (glutaminyl transferase); PFAM: RimK-like ATP-grasp domain; TIGRFAM: alpha-L-glutamate ligases, RimK family.
 
     0.660
AGB32831.1
Putative deacylase; PFAM: Succinylglutamate desuccinylase / Aspartoacylase family; PKD domain.
  
     0.601
AGB32439.1
alpha-L-glutamate ligase, RimK family; PFAM: Protein of unknown function (DUF785); RimK-like ATP-grasp domain; TIGRFAM: alpha-L-glutamate ligases, RimK family.
 
     0.543
AGB30532.1
NAD(P)H-nitrite reductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase.
      
 0.456
AGB30671.1
ABC-type Fe3+ transport system, periplasmic component; PFAM: Bacterial extracellular solute-binding protein.
 
   
 0.450
AGB30684.1
PFAM: Proline dehydrogenase.
       0.450
AGB33450.1
PFAM: RimK-like ATP-grasp domain; TIGRFAM: Lysine biosynthesis enzyme LysX; alpha-L-glutamate ligases, RimK family.
 
     0.418
Your Current Organism:
Natrinema pellirubrum
NCBI taxonomy Id: 797303
Other names: N. pellirubrum DSM 15624, Natrinema pellirubrum DSM 15624, Natrinema pellirubrum JCM 10476, Natrinema pellirubrum NCIMB 786, Natrinema pellirubrum str. DSM 15624, Natrinema pellirubrum strain DSM 15624
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