STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGB30745.1Hypothetical protein. (570 aa)    
Predicted Functional Partners:
AGB30746.1
ATPase, type IV secretory pathway VirB11 component like protein; PFAM: Type II/IV secretion system protein.
 
     0.918
AGB30748.1
Hypothetical protein.
       0.739
AGB30747.1
Hypothetical protein.
       0.737
AGB31078.1
Putative ATPase.
 
     0.686
AGB30741.1
Hypothetical protein.
       0.640
AGB30742.1
Hypothetical protein.
       0.640
AGB30743.1
Hypothetical protein.
       0.640
AGB30744.1
Hypothetical protein.
       0.640
AGB31183.1
Putative ATPase; PFAM: Domain of unknown function DUF87.
  
     0.608
AGB31164.1
Orc1/cdc6 family replication initiation protein; Involved in regulation of DNA replication.
  
     0.568
Your Current Organism:
Natrinema pellirubrum
NCBI taxonomy Id: 797303
Other names: N. pellirubrum DSM 15624, Natrinema pellirubrum DSM 15624, Natrinema pellirubrum JCM 10476, Natrinema pellirubrum NCIMB 786, Natrinema pellirubrum str. DSM 15624, Natrinema pellirubrum strain DSM 15624
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.