STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGB30746.1ATPase, type IV secretory pathway VirB11 component like protein; PFAM: Type II/IV secretion system protein. (647 aa)    
Predicted Functional Partners:
AGB30745.1
Hypothetical protein.
 
     0.963
AGB30748.1
Hypothetical protein.
       0.884
AGB30747.1
Hypothetical protein.
       0.855
AGB30741.1
Hypothetical protein.
       0.840
AGB30742.1
Hypothetical protein.
       0.840
AGB30744.1
Hypothetical protein.
       0.840
AGB30743.1
Hypothetical protein.
       0.729
AGB32563.1
Archaeal flagella assembly protein J; PFAM: Bacterial type II secretion system protein F domain.
 
  
 0.703
AGB32456.1
Archaeal flagella assembly protein J; PFAM: Bacterial type II secretion system protein F domain.
 
  
 0.654
AGB33070.1
Hypothetical protein.
       0.650
Your Current Organism:
Natrinema pellirubrum
NCBI taxonomy Id: 797303
Other names: N. pellirubrum DSM 15624, Natrinema pellirubrum DSM 15624, Natrinema pellirubrum JCM 10476, Natrinema pellirubrum NCIMB 786, Natrinema pellirubrum str. DSM 15624, Natrinema pellirubrum strain DSM 15624
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.