STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGB30937.1Hypothetical protein. (457 aa)    
Predicted Functional Partners:
AGB32027.1
Cupin domain-containing protein; PFAM: Cupin domain.
  
     0.675
AGB32197.1
PFAM: Uncharacterized conserved protein (DUF2249).
  
     0.628
AGB31769.1
Nucleotidyltransferase family protein; PFAM: Nucleotidyltransferase domain.
 
     0.612
AGB32384.1
Putative transcriptional regulator.
  
     0.581
AGB30276.1
Beta-carotene 15,15''-monooxygenase, Brp/Blh family; Catalyzes the cleavage of beta-carotene at its central double bond (15,15') to yield two molecules of all-trans-retinal. Belongs to the Brp/Blh beta-carotene diooxygenase family.
  
    0.573
AGB31811.1
Putative transcriptional regulator.
  
     0.572
AGB32697.1
Alcohol dehydrogenase, class IV; PFAM: Iron-containing alcohol dehydrogenase.
 
    0.572
AGB30936.1
PFAM: Protein of unknown function (DUF502).
       0.541
AGB30944.1
PFAM: Bacteriorhodopsin-like protein.
  
     0.519
AGB30430.1
Putative transcriptional regulator.
  
     0.504
Your Current Organism:
Natrinema pellirubrum
NCBI taxonomy Id: 797303
Other names: N. pellirubrum DSM 15624, Natrinema pellirubrum DSM 15624, Natrinema pellirubrum JCM 10476, Natrinema pellirubrum NCIMB 786, Natrinema pellirubrum str. DSM 15624, Natrinema pellirubrum strain DSM 15624
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.