STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGB30938.1PFAM: Integral membrane protein DUF95. (509 aa)    
Predicted Functional Partners:
AGB33584.1
Phosphatidylinositol kinase and protein kinases of the PI-3 kinase family; PFAM: PAP2 superfamily.
  
    0.615
AGB32647.1
PFAM: Acetyltransferase (GNAT) family.
  
    0.573
AGB30328.1
Hypothetical protein.
  
     0.571
AGB30939.1
Ketosteroid isomerase-like protein.
       0.553
AGB32544.1
Membrane-associated phospholipid phosphatase; PFAM: PAP2 superfamily.
  
    0.549
AGB31169.1
PFAM: Cytochrome C biogenesis protein transmembrane region.
  
     0.502
AGB30873.1
CARDB domain-containing protein; PFAM: CARDB.
  
     0.483
AGB32830.1
Putative xylanase/chitin deacetylase; PFAM: Polysaccharide deacetylase.
  
     0.477
AGB31334.1
Kef-type K+ transport system, membrane component; PFAM: Sodium/hydrogen exchanger family.
   
    0.473
AGB30940.1
Peroxiredoxin; PFAM: AhpC/TSA family.
       0.465
Your Current Organism:
Natrinema pellirubrum
NCBI taxonomy Id: 797303
Other names: N. pellirubrum DSM 15624, Natrinema pellirubrum DSM 15624, Natrinema pellirubrum JCM 10476, Natrinema pellirubrum NCIMB 786, Natrinema pellirubrum str. DSM 15624, Natrinema pellirubrum strain DSM 15624
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.