STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGB30956.1Putative membrane protein; PFAM: Ribonuclease BN-like family; TIGRFAM: YihY family protein (not ribonuclease BN). (435 aa)    
Predicted Functional Partners:
trm1
N2,N2-dimethylguanosine tRNA methyltransferase; Dimethylates a single guanine residue at position 26 of a number of tRNAs using S-adenosyl-L-methionine as donor of the methyl groups; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family.
       0.764
AGB30953.1
Putative metal-binding protein.
       0.762
AGB33196.1
Membrane-associated phospholipid phosphatase; PFAM: PAP2 superfamily.
 
     0.612
AGB30419.1
Membrane-associated phospholipid phosphatase; PFAM: PAP2 superfamily.
 
     0.567
AGB30843.1
PFAM: PAP2 superfamily.
 
     0.532
AGB30955.1
Hypothetical protein.
       0.513
AGB32345.1
NhaP-type Na+(K+)/H+ antiporter; PFAM: Sodium/hydrogen exchanger family.
 
   
 0.451
AGB33367.1
NhaP-type Na+(K+)/H+ antiporter; PFAM: TrkA-N domain; TrkA-C domain; Sodium/hydrogen exchanger family.
 
   
 0.402
Your Current Organism:
Natrinema pellirubrum
NCBI taxonomy Id: 797303
Other names: N. pellirubrum DSM 15624, Natrinema pellirubrum DSM 15624, Natrinema pellirubrum JCM 10476, Natrinema pellirubrum NCIMB 786, Natrinema pellirubrum str. DSM 15624, Natrinema pellirubrum strain DSM 15624
Server load: low (24%) [HD]