STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGB31068.1Uncharacterized protein with SCP/PR1 domains; PFAM: Cysteine-rich secretory protein family. (246 aa)    
Predicted Functional Partners:
AGB32776.1
PFAM: Branched-chain amino acid transport system / permease component.
   
   0.641
AGB31067.1
Putative membrane protein; PFAM: Ribonuclease BN-like family; TIGRFAM: YihY family protein (not ribonuclease BN).
 
     0.633
AGB31069.1
TIGRFAM: lycopene cyclase domain.
       0.631
AGB31070.1
CBS-domain-containing membrane protein; PFAM: CBS domain.
     
 0.470
AGB31066.1
Hypothetical protein.
       0.412
AGB31766.1
Subtilisin-like serine protease; PFAM: Subtilase family; Belongs to the peptidase S8 family.
 
   
 0.405
Your Current Organism:
Natrinema pellirubrum
NCBI taxonomy Id: 797303
Other names: N. pellirubrum DSM 15624, Natrinema pellirubrum DSM 15624, Natrinema pellirubrum JCM 10476, Natrinema pellirubrum NCIMB 786, Natrinema pellirubrum str. DSM 15624, Natrinema pellirubrum strain DSM 15624
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.