STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGB31122.1Hypothetical protein. (106 aa)    
Predicted Functional Partners:
AGB31119.1
poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit; PFAM: Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus; alpha/beta hydrolase fold; TIGRFAM: poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit.
       0.841
AGB31120.1
PFAM: Poly(R)-hydroxyalkanoic acid synthase subunit (PHA_synth_III_E).
       0.830
AGB31121.1
Hypothetical protein.
       0.812
AGB31123.1
Acyl dehydratase; PFAM: MaoC like domain.
       0.529
AGB31118.1
Dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein; PFAM: short chain dehydrogenase.
       0.450
Your Current Organism:
Natrinema pellirubrum
NCBI taxonomy Id: 797303
Other names: N. pellirubrum DSM 15624, Natrinema pellirubrum DSM 15624, Natrinema pellirubrum JCM 10476, Natrinema pellirubrum NCIMB 786, Natrinema pellirubrum str. DSM 15624, Natrinema pellirubrum strain DSM 15624
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.