STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGB31171.1PAS domain S-box; PFAM: HTH DNA binding domain; PAS fold; TIGRFAM: PAS domain S-box. (1096 aa)    
Predicted Functional Partners:
AGB30873.1
CARDB domain-containing protein; PFAM: CARDB.
  
     0.600
AGB32437.1
Hypothetical protein.
  
    0.596
AGB32498.1
Hypothetical protein.
  
     0.560
AGB30024.1
PFAM: Heme NO binding.
  
     0.529
AGB29965.1
Signal transduction histidine kinase; PFAM: GAF domain; PAS fold.
 
  
 0.517
AGB31210.1
PAS domain S-box; PFAM: PAS fold; TIGRFAM: PAS domain S-box.
  
     0.512
AGB31191.1
Hypothetical protein.
  
     0.502
AGB30594.1
Hypothetical protein; PFAM: FemAB family.
  
     0.499
AGB31988.1
PFAM: Cytochrome oxidase assembly protein.
  
     0.498
AGB30610.1
PFAM: Heme NO binding.
  
     0.496
Your Current Organism:
Natrinema pellirubrum
NCBI taxonomy Id: 797303
Other names: N. pellirubrum DSM 15624, Natrinema pellirubrum DSM 15624, Natrinema pellirubrum JCM 10476, Natrinema pellirubrum NCIMB 786, Natrinema pellirubrum str. DSM 15624, Natrinema pellirubrum strain DSM 15624
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.