Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGB31183.1Putative ATPase; PFAM: Domain of unknown function DUF87. (586 aa)    
Predicted Functional Partners:
AGB30745.1
Hypothetical protein.
  
     0.608
rad25
DNA/RNA helicase, superfamily II; PFAM: Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit.
       0.543
AGB32633.1
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; PFAM: Redoxin.
  
     0.532
AGB31294.1
PFAM: MutS domain V.
  
     0.482
AGB32456.1
Archaeal flagella assembly protein J; PFAM: Bacterial type II secretion system protein F domain.
 
   
 0.476
AGB31383.1
Putative permease; PFAM: Sulfite exporter TauE/SafE.
 
     0.473
AGB30237.1
Putative flavin-nucleotide-binding protein; PFAM: Pyridoxamine 5'-phosphate oxidase.
  
     0.471
AGB31164.1
Orc1/cdc6 family replication initiation protein; Involved in regulation of DNA replication.
 
   
 0.471
AGB32547.1
PFAM: Protein of unknown function (DUF2797).
  
     0.452
AGB32886.1
Arabinose efflux permease family protein; PFAM: Major Facilitator Superfamily.
 
     0.443
Your Current Organism:
Natrinema pellirubrum
NCBI taxonomy Id: 797303
Other names: N. pellirubrum DSM 15624, Natrinema pellirubrum DSM 15624, Natrinema pellirubrum JCM 10476, Natrinema pellirubrum NCIMB 786, Natrinema pellirubrum str. DSM 15624, Natrinema pellirubrum strain DSM 15624
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