STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGB31192.1Hypothetical protein; PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase. (537 aa)    
Predicted Functional Partners:
AGB31193.1
Putative methicillin resistance protein; PFAM: FemAB family.
 
     0.700
AGB31202.1
Putative methicillin resistance protein; PFAM: FemAB family.
 
     0.532
AGB32001.1
Arylsulfatase A family protein; PFAM: Sulfatase.
 
     0.483
AGB32626.1
PFAM: Arylsulfotransferase (ASST).
 
     0.459
AGB32006.1
PFAM: Arylsulfotransferase (ASST).
 
     0.444
AGB31180.1
PFAM: FemAB family.
 
     0.428
AGB32440.1
Membrane protein involved in the export of O-antigen and teichoic acid; PFAM: Polysaccharide biosynthesis protein.
 
     0.424
AGB31201.1
Arylsulfatase A family protein; PFAM: Sulfatase.
 
     0.406
AGB31198.1
Membrane protein involved in the export of O-antigen and teichoic acid; PFAM: Polysaccharide biosynthesis protein.
 
     0.405
Your Current Organism:
Natrinema pellirubrum
NCBI taxonomy Id: 797303
Other names: N. pellirubrum DSM 15624, Natrinema pellirubrum DSM 15624, Natrinema pellirubrum JCM 10476, Natrinema pellirubrum NCIMB 786, Natrinema pellirubrum str. DSM 15624, Natrinema pellirubrum strain DSM 15624
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.