STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGB31194.1Putative membrane protein; PFAM: Protein of unknown function (DUF1616). (342 aa)    
Predicted Functional Partners:
AGB33402.1
Putative Zn-finger protein.
  
     0.661
AGB32063.1
PFAM: Protein of unknown function (DUF447).
  
     0.648
AGB31475.1
PFAM: Uncharacterized protein conserved in archaea (DUF2150).
  
     0.610
AGB31906.1
RecJ-like exonuclease with DnaJ-type Zn-finger domain; PFAM: DHH family; OB-fold nucleic acid binding domain.
  
    0.600
AGB30252.1
PFAM: Uncharacterised protein family (UPF0146); Belongs to the UPF0146 family.
  
     0.595
AGB32381.1
PFAM: Protein of unknown function (DUF555); Belongs to the UPF0212 family.
  
     0.585
AGB31109.1
PFAM: Protein of unknown function (DUF555); Belongs to the UPF0212 family.
  
     0.584
AGB33594.1
PFAM: Kinase binding protein CGI-121.
  
     0.580
AGB30587.1
ACT-domain-containing protein, predicted allosteric regulator of homoserine dehydrogenase.
  
     0.563
cofC
2-phospho-L-lactate guanylyltransferase; Guanylyltransferase that catalyzes the activation of phosphoenolpyruvate (PEP) as enolpyruvoyl-2-diphospho-5'-guanosine, via the condensation of PEP with GTP. It is involved in the biosynthesis of coenzyme F420, a hydride carrier cofactor; Belongs to the CofC family.
  
     0.561
Your Current Organism:
Natrinema pellirubrum
NCBI taxonomy Id: 797303
Other names: N. pellirubrum DSM 15624, Natrinema pellirubrum DSM 15624, Natrinema pellirubrum JCM 10476, Natrinema pellirubrum NCIMB 786, Natrinema pellirubrum str. DSM 15624, Natrinema pellirubrum strain DSM 15624
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.