STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGB31220.1PFAM: Glycosyl transferase family 2. (359 aa)    
Predicted Functional Partners:
AGB31223.1
Putative PLP-dependent enzyme possibly involved in cell wall biogenesis; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.892
AGB31222.1
Putative dehydrogenase; PFAM: Oxidoreductase family, NAD-binding Rossmann fold.
 
  
 0.874
AGB31221.1
Nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
  
 0.868
AGB31224.1
N-acetylglucosamine-1-phosphate uridylyltransferase/acetyltransferase; PFAM: Bacterial transferase hexapeptide (three repeats).
  
  
 0.839
AGB30905.1
PFAM: Glycosyl transferase family 2; TIGRFAM: glycosyltransferase, TIGR04182 family.
  
   
 0.623
AGB32822.1
PFAM: Protein of unknown function (DUF354).
 
  
 0.536
AGB30668.1
PFAM: Glycosyl transferase family 2.
  
     0.499
AGB30919.1
Putative membrane protein, required for N-linked glycosylation; PFAM: Oligosaccharyl transferase STT3 subunit; TIGRFAM: oligosaccharyl transferase, archaeosortase system-associated.
 
 
 0.487
AGB31204.1
PFAM: Protein of unknown function (DUF354).
 
  
 0.459
AGB31218.1
PFAM: Protein of unknown function (DUF354).
 
  
 0.453
Your Current Organism:
Natrinema pellirubrum
NCBI taxonomy Id: 797303
Other names: N. pellirubrum DSM 15624, Natrinema pellirubrum DSM 15624, Natrinema pellirubrum JCM 10476, Natrinema pellirubrum NCIMB 786, Natrinema pellirubrum str. DSM 15624, Natrinema pellirubrum strain DSM 15624
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.