STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGB31257.1Site-specific recombinase XerD; PFAM: Phage integrase, N-terminal SAM-like domain. (374 aa)    
Predicted Functional Partners:
AGB30873.1
CARDB domain-containing protein; PFAM: CARDB.
  
     0.691
AGB32437.1
Hypothetical protein.
  
     0.681
AGB31180.1
PFAM: FemAB family.
  
     0.669
AGB32303.1
Hypothetical protein.
  
     0.667
AGB32830.1
Putative xylanase/chitin deacetylase; PFAM: Polysaccharide deacetylase.
  
     0.656
AGB32042.1
3-hydroxy-3-methylglutaryl CoA synthase; PFAM: Rubredoxin-like zinc ribbon domain (DUF35_N).
  
     0.631
AGB30900.1
Putative ring-cleavage extradiol dioxygenase.
  
     0.617
AGB32829.1
PFAM: Asparagine synthase.
  
     0.610
AGB32027.1
Cupin domain-containing protein; PFAM: Cupin domain.
  
     0.605
AGB31191.1
Hypothetical protein.
  
     0.603
Your Current Organism:
Natrinema pellirubrum
NCBI taxonomy Id: 797303
Other names: N. pellirubrum DSM 15624, Natrinema pellirubrum DSM 15624, Natrinema pellirubrum JCM 10476, Natrinema pellirubrum NCIMB 786, Natrinema pellirubrum str. DSM 15624, Natrinema pellirubrum strain DSM 15624
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.