STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AGB31286.1PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase. (337 aa)    
Predicted Functional Partners:
AGB31287.1
Ferredoxin; PFAM: 2Fe-2S iron-sulfur cluster binding domain.
     
 0.559
AGB33345.1
PFAM: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD.
  
 
 0.536
AGB33187.1
Putative oxidoreductase, aryl-alcohol dehydrogenase like protein; PFAM: Aldo/keto reductase family.
 
 
 0.524
AGB31974.1
PFAM: Aldo/keto reductase family.
 
 
 0.520
AGB31285.1
PFAM: NAD dependent epimerase/dehydratase family.
  
  
 0.477
AGB33213.1
Deacetylase, histone deacetylase/acetoin utilization protein; PFAM: Histone deacetylase domain.
 
   0.469
AGB33414.1
Putative NADP-dependent oxidoreductase; PFAM: Zinc-binding dehydrogenase.
  
 
 0.428
AGB31651.1
Thiamine pyrophosphate-dependent enzyme, possible carboligase or decarboxylase; PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; Belongs to the TPP enzyme family.
 
 
 0.420
AGB32656.1
PFAM: NmrA-like family.
 
 
 0.415
AGB32772.1
PFAM: NmrA-like family.
 
 
 0.407
Your Current Organism:
Natrinema pellirubrum
NCBI taxonomy Id: 797303
Other names: N. pellirubrum DSM 15624, Natrinema pellirubrum DSM 15624, Natrinema pellirubrum JCM 10476, Natrinema pellirubrum NCIMB 786, Natrinema pellirubrum str. DSM 15624, Natrinema pellirubrum strain DSM 15624
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