STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGB31366.1Hypothetical protein. (301 aa)    
Predicted Functional Partners:
AGB31368.1
Nitrous oxidase accessory protein; PFAM: NosL; TIGRFAM: parallel beta-helix repeat (two copies).
 
     0.958
AGB31367.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
 
     0.930
AGB31365.1
Putative lipoprotein involved in nitrous oxide reduction; PFAM: NosL.
 
     0.709
AGB30410.1
ABC-type transport system involved in multi-copper enzyme maturation, permease component.
  
     0.649
AGB30975.1
Hypothetical protein.
  
     0.561
AGB30111.1
Hypothetical protein.
  
     0.525
AGB32267.1
Heme/copper-type cytochrome/quinol oxidase, subunit 2; PFAM: TAT (twin-arginine translocation) pathway signal sequence; Cytochrome C oxidase subunit II, periplasmic domain; Cytochrome D1 heme domain.
  
     0.515
AGB31857.1
PFAM: Cytochrome D1 heme domain.
  
     0.500
AGB31665.1
Hypothetical protein.
  
     0.498
AGB33511.1
ABC-type transport system involved in multi-copper enzyme maturation, permease component.
  
     0.465
Your Current Organism:
Natrinema pellirubrum
NCBI taxonomy Id: 797303
Other names: N. pellirubrum DSM 15624, Natrinema pellirubrum DSM 15624, Natrinema pellirubrum JCM 10476, Natrinema pellirubrum NCIMB 786, Natrinema pellirubrum str. DSM 15624, Natrinema pellirubrum strain DSM 15624
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.