STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AGB31390.1Putative transporter component; PFAM: YeeE/YedE family (DUF395). (144 aa)    
Predicted Functional Partners:
AGB31391.1
Putative transporter component; PFAM: YeeE/YedE family (DUF395).
 
     0.958
AGB31392.1
Zn-dependent hydrolase, glyoxylase; PFAM: Metallo-beta-lactamase superfamily; Rhodanese-like domain.
 
    0.872
AGB31393.1
Putative redox protein, regulator of disulfide bond formation; PFAM: SirA-like protein.
  
  
 0.742
AGB31389.1
Phosphate/sulfate permease; PFAM: Phosphate transporter family.
  
    0.652
AGB31394.1
Hypothetical protein.
       0.625
AGB33037.1
Zn-dependent hydrolase, glyoxylase; PFAM: Metallo-beta-lactamase superfamily; Rhodanese-like domain.
 
    0.537
AGB31361.1
Zn-dependent hydrolase, glyoxylase; PFAM: Metallo-beta-lactamase superfamily; Rhodanese-like domain.
 
    0.526
AGB31800.1
Zn-dependent hydrolase, glyoxylase; PFAM: Metallo-beta-lactamase superfamily; Rhodanese-like domain.
 
    0.522
AGB30648.1
Sulfite reductase, beta subunit (hemoprotein); PFAM: Nitrite and sulphite reductase 4Fe-4S domain; Rhodanese-like domain; Nitrite/Sulfite reductase ferredoxin-like half domain.
  
  
 0.465
AGB32692.1
Putative redox protein, regulator of disulfide bond formation; PFAM: SirA-like protein.
  
  
 0.402
Your Current Organism:
Natrinema pellirubrum
NCBI taxonomy Id: 797303
Other names: N. pellirubrum DSM 15624, Natrinema pellirubrum DSM 15624, Natrinema pellirubrum JCM 10476, Natrinema pellirubrum NCIMB 786, Natrinema pellirubrum str. DSM 15624, Natrinema pellirubrum strain DSM 15624
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