Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AGB31413.1Mn2+/Fe2- transporter, NRAMP family; PFAM: Natural resistance-associated macrophage protein. (412 aa)    
Predicted Functional Partners:
AGB31414.1
Hypothetical protein.
       0.558
AGB32255.1
ABC-type Mn2+/Zn2+ transport system, permease component; PFAM: ABC 3 transport family.
  
  
 0.529
AGB30310.1
PFAM: V-type ATPase 116kDa subunit family; Belongs to the V-ATPase 116 kDa subunit family.
   
 0.494
AGB31415.1
Hypothetical protein.
       0.476
AGB31416.1
Hypothetical protein.
     
 0.469
AGB31428.1
PFAM: Glucose / Sorbosone dehydrogenase; Copper binding proteins, plastocyanin/azurin family.
 
 
 0.436
AGB33085.1
PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter.
  
 
 0.412
AGB31417.1
Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase component; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
  
  
 0.405
Your Current Organism:
Natrinema pellirubrum
NCBI taxonomy Id: 797303
Other names: N. pellirubrum DSM 15624, Natrinema pellirubrum DSM 15624, Natrinema pellirubrum JCM 10476, Natrinema pellirubrum NCIMB 786, Natrinema pellirubrum str. DSM 15624, Natrinema pellirubrum strain DSM 15624
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