Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGB31428.1PFAM: Glucose / Sorbosone dehydrogenase; Copper binding proteins, plastocyanin/azurin family. (657 aa)    
Predicted Functional Partners:
AGB32569.1
Plastocyanin; PFAM: Copper binding proteins, plastocyanin/azurin family.
 
 
 
 0.678
AGB32193.1
Plastocyanin; PFAM: Copper binding proteins, plastocyanin/azurin family.
   
 
 0.616
AGB32058.1
Plastocyanin; PFAM: Copper binding proteins, plastocyanin/azurin family; TIGRFAM: plastocyanin.
   
 
 0.591
speE
Putative spermidine synthase with an N-terminal membrane domain; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.
 
   
 0.548
AGB31607.1
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
     
 0.537
tatA
Twin arginine-targeting protein translocase, TatA/E family; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.
   
 
 0.529
AGB30061.1
Putative permease; PFAM: YHS domain; Predicted permease.
  
  
 0.518
AGB31842.1
PFAM: Predicted permease.
  
  
 0.518
AGB30702.1
Esterase/lipase; PFAM: alpha/beta hydrolase fold.
 
 
 0.508
AGB32842.1
Putative restriction endonuclease; PFAM: HNH endonuclease.
  
  
 0.508
Your Current Organism:
Natrinema pellirubrum
NCBI taxonomy Id: 797303
Other names: N. pellirubrum DSM 15624, Natrinema pellirubrum DSM 15624, Natrinema pellirubrum JCM 10476, Natrinema pellirubrum NCIMB 786, Natrinema pellirubrum str. DSM 15624, Natrinema pellirubrum strain DSM 15624
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.