rps28e protein (Natrinema pellirubrum) - STRING interaction network

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Score

rps28e

PFAM: Ribosomal protein S28e; Belongs to the eukaryotic ribosomal protein eS28 family. (74 aa)

Predicted Functional Partners:

rps6e

0.999

rps14P

0.999

rpl7ae

0.999

rpl24e

0.999

rps19e

0.998

rps19p

0.998

rps3p

0.998

rps17p

0.998

rps4e

0.998

rps8p

0.998

Your Current Organism:

Natrinema pellirubrum

NCBI taxonomy Id: 797303
Other names: N. pellirubrum DSM 15624, Natrinema pellirubrum DSM 15624, Natrinema pellirubrum JCM 10476, Natrinema pellirubrum NCIMB 786, Natrinema pellirubrum str. DSM 15624, Natrinema pellirubrum strain DSM 15624

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rpl24e	rpl7ae	Natpe_1710	Natpe_1708	Ribosomal protein L24E; Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL24 family.	50S ribosomal protein L7Ae; Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs.	0.999
rpl24e	rps14P	Natpe_1710	Natpe_0884	Ribosomal protein L24E; Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL24 family.	Ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles.	0.992
rpl24e	rps17p	Natpe_1710	Natpe_0879	Ribosomal protein L24E; Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL24 family.	Archaeal ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	0.988
rpl24e	rps19e	Natpe_1710	Natpe_0447	Ribosomal protein L24E; Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL24 family.	Ribosomal protein S19E (S16A); May be involved in maturation of the 30S ribosomal subunit. Belongs to the eukaryotic ribosomal protein eS19 family.	0.996
rpl24e	rps19p	Natpe_1710	Natpe_0874	Ribosomal protein L24E; Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL24 family.	Ribosomal protein S19/S15; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.	0.986
rpl24e	rps28e	Natpe_1710	Natpe_1709	Ribosomal protein L24E; Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL24 family.	PFAM: Ribosomal protein S28e; Belongs to the eukaryotic ribosomal protein eS28 family.	0.999
rpl24e	rps3p	Natpe_1710	Natpe_0876	Ribosomal protein L24E; Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL24 family.	Ribosomal protein S3, eukaryotic/archaeal type; Binds the lower part of the 30S subunit head. Belongs to the universal ribosomal protein uS3 family.	0.986
rpl24e	rps4e	Natpe_1710	Natpe_0882	Ribosomal protein L24E; Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL24 family.	PFAM: Ribosomal family S4e; RS4NT (NUC023) domain; Belongs to the eukaryotic ribosomal protein eS4 family.	0.995
rpl24e	rps6e	Natpe_1710	Natpe_0529	Ribosomal protein L24E; Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL24 family.	PFAM: Ribosomal protein S6e; Belongs to the eukaryotic ribosomal protein eS6 family.	0.996
rpl24e	rps8p	Natpe_1710	Natpe_0885	Ribosomal protein L24E; Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL24 family.	Ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.	0.987
rpl7ae	rpl24e	Natpe_1708	Natpe_1710	50S ribosomal protein L7Ae; Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs.	Ribosomal protein L24E; Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL24 family.	0.999
rpl7ae	rps14P	Natpe_1708	Natpe_0884	50S ribosomal protein L7Ae; Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs.	Ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles.	0.997
rpl7ae	rps17p	Natpe_1708	Natpe_0879	50S ribosomal protein L7Ae; Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs.	Archaeal ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	0.997
rpl7ae	rps19e	Natpe_1708	Natpe_0447	50S ribosomal protein L7Ae; Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs.	Ribosomal protein S19E (S16A); May be involved in maturation of the 30S ribosomal subunit. Belongs to the eukaryotic ribosomal protein eS19 family.	0.998
rpl7ae	rps19p	Natpe_1708	Natpe_0874	50S ribosomal protein L7Ae; Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs.	Ribosomal protein S19/S15; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.	0.997
rpl7ae	rps28e	Natpe_1708	Natpe_1709	50S ribosomal protein L7Ae; Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs.	PFAM: Ribosomal protein S28e; Belongs to the eukaryotic ribosomal protein eS28 family.	0.999
rpl7ae	rps3p	Natpe_1708	Natpe_0876	50S ribosomal protein L7Ae; Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs.	Ribosomal protein S3, eukaryotic/archaeal type; Binds the lower part of the 30S subunit head. Belongs to the universal ribosomal protein uS3 family.	0.998
rpl7ae	rps4e	Natpe_1708	Natpe_0882	50S ribosomal protein L7Ae; Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs.	PFAM: Ribosomal family S4e; RS4NT (NUC023) domain; Belongs to the eukaryotic ribosomal protein eS4 family.	0.998
rpl7ae	rps6e	Natpe_1708	Natpe_0529	50S ribosomal protein L7Ae; Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs.	PFAM: Ribosomal protein S6e; Belongs to the eukaryotic ribosomal protein eS6 family.	0.999
rpl7ae	rps8p	Natpe_1708	Natpe_0885	50S ribosomal protein L7Ae; Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs.	Ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.	0.998

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