STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGB31633.1PFAM: Response regulator receiver domain. (67 aa)    
Predicted Functional Partners:
AGB33427.1
PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain.
  
 0.960
AGB32469.1
PFAM: Response regulator receiver domain.
 
 0.959
AGB31639.1
PAS domain S-box; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; GAF domain; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box.
 
 
 0.943
AGB30526.1
PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain.
  
 0.938
AGB30609.1
PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain.
  
 0.936
AGB32470.1
Chemotaxis signal transduction protein; PFAM: CheW-like domain.
  
 
 0.921
AGB32471.1
Chemotaxis signal transduction protein; PFAM: CheW-like domain.
  
 
 0.921
AGB32465.1
Chemotaxis protein CheC, inhibitor of MCP methylation; PFAM: CheC-like family.
    
 0.907
AGB32466.1
Chemotaxis protein CheC, inhibitor of MCP methylation; PFAM: CheC-like family.
    
 0.907
AGB32467.1
Chemotaxis protein histidine kinase-like protein; PFAM: CheW-like domain; P2 response regulator binding domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Signal transducing histidine kinase, homodimeric domain; Hpt domain.
    
  0.904
Your Current Organism:
Natrinema pellirubrum
NCBI taxonomy Id: 797303
Other names: N. pellirubrum DSM 15624, Natrinema pellirubrum DSM 15624, Natrinema pellirubrum JCM 10476, Natrinema pellirubrum NCIMB 786, Natrinema pellirubrum str. DSM 15624, Natrinema pellirubrum strain DSM 15624
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