STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGB31664.1ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter. (304 aa)    
Predicted Functional Partners:
AGB31665.1
Hypothetical protein.
 
 
 0.935
AGB31666.1
Hypothetical protein.
 
 
 0.922
AGB30111.1
Hypothetical protein.
 
 
 0.749
AGB33511.1
ABC-type transport system involved in multi-copper enzyme maturation, permease component.
 
 
 0.713
AGB33610.1
ABC-type transport system involved in multi-copper enzyme maturation, permease component.
 
 
 0.672
AGB33194.1
ABC-type multidrug transport system, ATPase and permease component; PFAM: ABC transporter transmembrane region; ABC transporter.
 
0.630
AGB30875.1
ABC-type cobalt transport system, ATPase component; PFAM: ABC transporter; TIGRFAM: cobalt transport protein ATP-binding subunit.
   
0.597
AGB31663.1
PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain.
 
     0.568
AGB31368.1
Nitrous oxidase accessory protein; PFAM: NosL; TIGRFAM: parallel beta-helix repeat (two copies).
 
  
 0.546
AGB30410.1
ABC-type transport system involved in multi-copper enzyme maturation, permease component.
 
 
 0.544
Your Current Organism:
Natrinema pellirubrum
NCBI taxonomy Id: 797303
Other names: N. pellirubrum DSM 15624, Natrinema pellirubrum DSM 15624, Natrinema pellirubrum JCM 10476, Natrinema pellirubrum NCIMB 786, Natrinema pellirubrum str. DSM 15624, Natrinema pellirubrum strain DSM 15624
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.