STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGB31666.1Hypothetical protein. (270 aa)    
Predicted Functional Partners:
AGB31664.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
 
 
 0.922
AGB31665.1
Hypothetical protein.
 
    
0.852
AGB31368.1
Nitrous oxidase accessory protein; PFAM: NosL; TIGRFAM: parallel beta-helix repeat (two copies).
 
  
 0.820
AGB31365.1
Putative lipoprotein involved in nitrous oxide reduction; PFAM: NosL.
 
  
 0.749
AGB32267.1
Heme/copper-type cytochrome/quinol oxidase, subunit 2; PFAM: TAT (twin-arginine translocation) pathway signal sequence; Cytochrome C oxidase subunit II, periplasmic domain; Cytochrome D1 heme domain.
  
    0.599
AGB31857.1
PFAM: Cytochrome D1 heme domain.
  
     0.576
AGB33611.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
 
 
 0.563
AGB30411.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
 
 
 0.547
AGB30720.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
 
 
 0.538
AGB33512.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
 
 
 0.537
Your Current Organism:
Natrinema pellirubrum
NCBI taxonomy Id: 797303
Other names: N. pellirubrum DSM 15624, Natrinema pellirubrum DSM 15624, Natrinema pellirubrum JCM 10476, Natrinema pellirubrum NCIMB 786, Natrinema pellirubrum str. DSM 15624, Natrinema pellirubrum strain DSM 15624
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.