Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGB31705.1Site-specific recombinase XerD; PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family. (372 aa)    
Predicted Functional Partners:
AGB31010.1
Putative HAD superfamily hydrolase; PFAM: haloacid dehalogenase-like hydrolase.
  
     0.564
AGB31704.1
Hypothetical protein.
       0.523
AGB32557.1
Hypothetical protein.
  
     0.497
AGB32302.1
PFAM: Thioredoxin.
  
     0.439
AGB32897.1
Putative ATPase.
  
   
 0.433
AGB30065.1
Hypothetical protein.
  
     0.429
AGB31706.1
Hypothetical protein.
       0.423
AGB31707.1
Hypothetical protein.
       0.423
AGB31708.1
Hypothetical protein.
       0.423
Your Current Organism:
Natrinema pellirubrum
NCBI taxonomy Id: 797303
Other names: N. pellirubrum DSM 15624, Natrinema pellirubrum DSM 15624, Natrinema pellirubrum JCM 10476, Natrinema pellirubrum NCIMB 786, Natrinema pellirubrum str. DSM 15624, Natrinema pellirubrum strain DSM 15624
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