STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGB31769.1Nucleotidyltransferase family protein; PFAM: Nucleotidyltransferase domain. (221 aa)    
Predicted Functional Partners:
AGB31770.1
Hypothetical protein.
       0.901
AGB30014.1
CBS-domain-containing membrane protein; PFAM: HPP family.
  
     0.661
AGB30937.1
Hypothetical protein.
 
     0.612
AGB32347.1
Hypothetical protein.
  
     0.563
AGB31801.1
PFAM: HTH DNA binding domain.
  
     0.554
AGB30267.1
PFAM: Peptidase S24-like; TIGRFAM: signal peptidase I, archaeal type.
 
     0.550
AGB31377.1
Hypothetical protein.
  
     0.522
AGB32197.1
PFAM: Uncharacterized conserved protein (DUF2249).
  
     0.514
AGB33259.1
Hypothetical protein; PFAM: Domain of unknown function (DUF1508).
  
     0.505
AGB30721.1
Hypothetical protein.
  
     0.503
Your Current Organism:
Natrinema pellirubrum
NCBI taxonomy Id: 797303
Other names: N. pellirubrum DSM 15624, Natrinema pellirubrum DSM 15624, Natrinema pellirubrum JCM 10476, Natrinema pellirubrum NCIMB 786, Natrinema pellirubrum str. DSM 15624, Natrinema pellirubrum strain DSM 15624
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.