STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGB31842.1PFAM: Predicted permease. (318 aa)    
Predicted Functional Partners:
AGB31841.1
Putative transcriptional regulator; PFAM: Bacterial regulatory protein, arsR family.
 
  
 0.922
AGB31840.1
Hypothetical protein.
       0.705
AGB31428.1
PFAM: Glucose / Sorbosone dehydrogenase; Copper binding proteins, plastocyanin/azurin family.
  
  
 0.518
AGB30011.1
Putative transcriptional regulator.
 
  
 0.513
AGB30012.1
Arsenical-resistance protein; PFAM: Sodium Bile acid symporter family; TIGRFAM: arsenical-resistance protein; manually curated.
 
  
 0.507
AGB30565.1
PFAM: Multicopper oxidase; TIGRFAM: nitrite reductase, copper-containing.
  
  
 0.492
AGB31993.1
PFAM: Multicopper oxidase.
  
  
 0.492
AGB32182.1
PFAM: Multicopper oxidase; TIGRFAM: nitrite reductase, copper-containing.
  
  
 0.492
AGB32705.1
PFAM: Copper binding proteins, plastocyanin/azurin family.
  
  
 0.492
AGB31355.1
Putative divalent heavy-metal cations transporter; PFAM: ZIP Zinc transporter.
  
    0.463
Your Current Organism:
Natrinema pellirubrum
NCBI taxonomy Id: 797303
Other names: N. pellirubrum DSM 15624, Natrinema pellirubrum DSM 15624, Natrinema pellirubrum JCM 10476, Natrinema pellirubrum NCIMB 786, Natrinema pellirubrum str. DSM 15624, Natrinema pellirubrum strain DSM 15624
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