close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGB31842.1PFAM: Predicted permease. (318 aa)    
Predicted Functional Partners:
AGB31841.1
Putative transcriptional regulator; PFAM: Bacterial regulatory protein, arsR family.
 
  
 0.876
AGB31840.1
Hypothetical protein.
       0.705
AGB31428.1
PFAM: Glucose / Sorbosone dehydrogenase; Copper binding proteins, plastocyanin/azurin family.
  
  
 0.550
AGB30011.1
Putative transcriptional regulator.
 
  
 0.521
AGB32404.1
Type I restriction-modification system methyltransferase subunit; PFAM: N-6 DNA Methylase; Eco57I restriction endonuclease.
 
    0.463
AGB30565.1
PFAM: Multicopper oxidase; TIGRFAM: nitrite reductase, copper-containing.
  
  
 0.449
AGB31993.1
PFAM: Multicopper oxidase.
  
  
 0.449
AGB32182.1
PFAM: Multicopper oxidase; TIGRFAM: nitrite reductase, copper-containing.
  
  
 0.449
AGB32705.1
PFAM: Copper binding proteins, plastocyanin/azurin family.
  
  
 0.449
AGB31839.1
Hypothetical protein.
       0.437
Your Current Organism:
Natrinema pellirubrum
NCBI taxonomy Id: 797303
Other names: N. pellirubrum DSM 15624, Natrinema pellirubrum DSM 15624, Natrinema pellirubrum JCM 10476, Natrinema pellirubrum NCIMB 786, Natrinema pellirubrum str. DSM 15624, Natrinema pellirubrum strain DSM 15624
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.