STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGB31903.1Hypothetical protein. (372 aa)    
Predicted Functional Partners:
AGB32522.1
WD40-like repeat protein; PFAM: PQQ enzyme repeat.
  
     0.619
AGB31134.1
WD40-like repeat protein; PFAM: PQQ enzyme repeat.
  
     0.615
AGB31902.1
Putative metal-dependent protease of the PAD1/JAB1 superfamily.
  
    0.610
AGB30597.1
PFAM: PQQ enzyme repeat.
  
     0.608
AGB33528.1
PFAM: PQQ enzyme repeat.
  
     0.599
AGB30287.1
WD40-like repeat protein.
  
     0.595
AGB32143.1
Hypothetical protein.
  
     0.583
ribL
Cytidyltransferase-related enzyme; Catalyzes the transfer of the AMP portion of ATP to flavin mononucleotide (FMN) to produce flavin adenine dinucleotide (FAD) coenzyme.
 
     0.447
Your Current Organism:
Natrinema pellirubrum
NCBI taxonomy Id: 797303
Other names: N. pellirubrum DSM 15624, Natrinema pellirubrum DSM 15624, Natrinema pellirubrum JCM 10476, Natrinema pellirubrum NCIMB 786, Natrinema pellirubrum str. DSM 15624, Natrinema pellirubrum strain DSM 15624
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.