STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGB31956.1PFAM: Protein of unknown function (DUF790). (534 aa)    
Predicted Functional Partners:
AGB31954.1
DNA/RNA helicase, superfamily II; PFAM: Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit.
 
 
 
 0.946
rad25
DNA/RNA helicase, superfamily II; PFAM: Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit.
 
 
 
 0.842
AGB31957.1
PFAM: lactate/malate dehydrogenase, alpha/beta C-terminal domain; lactate/malate dehydrogenase, NAD binding domain; Belongs to the LDH/MDH superfamily.
       0.586
AGB31955.1
Hypothetical protein; PFAM: DisA bacterial checkpoint controller nucleotide-binding.
       0.556
AGB31958.1
PFAM: Response regulator receiver domain.
       0.546
AGB32456.1
Archaeal flagella assembly protein J; PFAM: Bacterial type II secretion system protein F domain.
  
     0.533
AGB33158.1
Putative RNA-binding protein, contains TRAM domain; PFAM: TRAM domain.
  
     0.533
AGB31313.1
Putative Zn-ribbon RNA-binding protein with a function in translation; PFAM: Domain of unknown function (DUF1610).
  
     0.519
AGB32063.1
PFAM: Protein of unknown function (DUF447).
  
     0.510
AGB30015.1
Leader peptidase family protein; PFAM: Archaeal Peptidase A24 C-terminus Type II; Type IV leader peptidase family.
  
     0.506
Your Current Organism:
Natrinema pellirubrum
NCBI taxonomy Id: 797303
Other names: N. pellirubrum DSM 15624, Natrinema pellirubrum DSM 15624, Natrinema pellirubrum JCM 10476, Natrinema pellirubrum NCIMB 786, Natrinema pellirubrum str. DSM 15624, Natrinema pellirubrum strain DSM 15624
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.