STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGB31971.1PAPS reductase/FAD synthetase family protein; PFAM: Phosphoadenosine phosphosulfate reductase family. (323 aa)    
Predicted Functional Partners:
AGB32890.1
PFAM: Chromatin associated protein KTI12.
  
 
 0.967
AGB30648.1
Sulfite reductase, beta subunit (hemoprotein); PFAM: Nitrite and sulphite reductase 4Fe-4S domain; Rhodanese-like domain; Nitrite/Sulfite reductase ferredoxin-like half domain.
 
  
 0.933
AGB33485.1
Rhodanese-related sulfurtransferase; PFAM: Rhodanese-like domain.
    
 0.919
AGB33486.1
Rhodanese-related sulfurtransferase; PFAM: Rhodanese-like domain.
    
 0.919
AGB33459.1
Rhodanese-related sulfurtransferase; PFAM: Rhodanese-like domain.
    
 0.910
AGB32280.1
NifC-like ABC-type porter; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: NifC-like ABC-type porter.
  
  
 0.877
AGB33553.1
uroporphyrin-III C-methyltransferase; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: uroporphyrin-III C-methyltransferase.
 
  
 0.860
AGB30088.1
Sulfite reductase, beta subunit (hemoprotein); PFAM: Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain.
 
  
 0.820
AGB33495.1
Sulfite reductase, beta subunit (hemoprotein); PFAM: Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain.
 
  
 0.815
AGB32551.1
Hypothetical protein; PFAM: CbiX.
 
  
 0.701
Your Current Organism:
Natrinema pellirubrum
NCBI taxonomy Id: 797303
Other names: N. pellirubrum DSM 15624, Natrinema pellirubrum DSM 15624, Natrinema pellirubrum JCM 10476, Natrinema pellirubrum NCIMB 786, Natrinema pellirubrum str. DSM 15624, Natrinema pellirubrum strain DSM 15624
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