STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGB32085.1Hypothetical protein. (219 aa)    
Predicted Functional Partners:
AGB32086.1
Hypothetical protein.
      0.919
AGB32084.1
PFAM: Protein of unknown function (DUF1458).
 
     0.805
AGB32087.1
Hypothetical protein.
       0.761
AGB30861.1
PFAM: HTH DNA binding domain.
  
     0.529
AGB30489.1
PFAM: HTH DNA binding domain.
  
     0.462
AGB33102.1
Hypothetical protein.
  
     0.452
AGB31494.1
PFAM: HTH DNA binding domain.
  
     0.451
AGB33425.1
ABC-type Fe3+-hydroxamate transport system, periplasmic component; PFAM: Periplasmic binding protein.
  
     0.441
AGB31896.1
RecA-superfamily ATPase possibly involved in signal transduction.
  
     0.412
AGB32088.1
Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase; PFAM: Aminotransferase class-V.
       0.407
Your Current Organism:
Natrinema pellirubrum
NCBI taxonomy Id: 797303
Other names: N. pellirubrum DSM 15624, Natrinema pellirubrum DSM 15624, Natrinema pellirubrum JCM 10476, Natrinema pellirubrum NCIMB 786, Natrinema pellirubrum str. DSM 15624, Natrinema pellirubrum strain DSM 15624
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.