Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
AGB32190.1PFAM: Cytochrome C biogenesis protein transmembrane region. (220 aa)    
Predicted Functional Partners:
AGB32192.1
PFAM: SCO1/SenC.
 
   
 0.871
AGB32191.1
PFAM: Redoxin.
 
     0.827
AGB32557.1
Hypothetical protein.
  
     0.635
AGB32897.1
Putative ATPase.
  
     0.592
AGB32188.1
Heme/copper-type cytochrome/quinol oxidase, subunit 2; PFAM: Cytochrome C oxidase subunit II, periplasmic domain.
       0.566
AGB32189.1
Hypothetical protein.
       0.566
AGB32302.1
PFAM: Thioredoxin.
  
   
 0.547
AGB33101.1
PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E.
  
     0.512
AGB32193.1
Plastocyanin; PFAM: Copper binding proteins, plastocyanin/azurin family.
       0.501
AGB31167.1
Electron transport protein SCO1/SenC; PFAM: SCO1/SenC.
 
   
 0.499
Your Current Organism:
Natrinema pellirubrum
NCBI taxonomy Id: 797303
Other names: N. pellirubrum DSM 15624, Natrinema pellirubrum DSM 15624, Natrinema pellirubrum JCM 10476, Natrinema pellirubrum NCIMB 786, Natrinema pellirubrum str. DSM 15624, Natrinema pellirubrum strain DSM 15624
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