STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGB32192.1PFAM: SCO1/SenC. (249 aa)    
Predicted Functional Partners:
AGB32188.1
Heme/copper-type cytochrome/quinol oxidase, subunit 2; PFAM: Cytochrome C oxidase subunit II, periplasmic domain.
 
 0.896
AGB32190.1
PFAM: Cytochrome C biogenesis protein transmembrane region.
 
   
 0.871
AGB32191.1
PFAM: Redoxin.
 
     0.840
AGB30815.1
Heme/copper-type cytochrome/quinol oxidase, subunit 1; PFAM: Cytochrome c oxidase subunit III; Cytochrome C and Quinol oxidase polypeptide I; Belongs to the heme-copper respiratory oxidase family.
 
 
 0.831
AGB30216.1
Heme/copper-type cytochrome/quinol oxidase, subunit 1; PFAM: Cytochrome c oxidase subunit III; Cytochrome C and Quinol oxidase polypeptide I; Belongs to the heme-copper respiratory oxidase family.
 
 
 0.830
AGB33170.1
Heme/copper-type cytochrome/quinol oxidase, subunit 2; PFAM: Cytochrome C oxidase subunit II, periplasmic domain.
 
 0.771
AGB31168.1
Thiol:disulfide interchange protein; PFAM: Redoxin.
 
     0.760
AGB30816.1
PFAM: Cytochrome C oxidase subunit II, periplasmic domain; TIGRFAM: cytochrome c oxidase, subunit II.
 
 0.738
AGB32078.1
PFAM: Cytochrome C oxidase subunit II, periplasmic domain; Cytochrome C oxidase subunit II, transmembrane domain; TIGRFAM: cytochrome c oxidase, subunit II.
 
 0.720
AGB33171.1
Heme/copper-type cytochrome/quinol oxidase, subunit 1; PFAM: Cytochrome C and Quinol oxidase polypeptide I.
 
 
 0.690
Your Current Organism:
Natrinema pellirubrum
NCBI taxonomy Id: 797303
Other names: N. pellirubrum DSM 15624, Natrinema pellirubrum DSM 15624, Natrinema pellirubrum JCM 10476, Natrinema pellirubrum NCIMB 786, Natrinema pellirubrum str. DSM 15624, Natrinema pellirubrum strain DSM 15624
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