STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AGB32193.1Plastocyanin; PFAM: Copper binding proteins, plastocyanin/azurin family. (193 aa)    
Predicted Functional Partners:
AGB30565.1
PFAM: Multicopper oxidase; TIGRFAM: nitrite reductase, copper-containing.
   
 
 0.675
AGB32182.1
PFAM: Multicopper oxidase; TIGRFAM: nitrite reductase, copper-containing.
   
 
 0.675
AGB32192.1
PFAM: SCO1/SenC.
       0.644
AGB31428.1
PFAM: Glucose / Sorbosone dehydrogenase; Copper binding proteins, plastocyanin/azurin family.
   
 
 0.616
AGB32191.1
PFAM: Redoxin.
       0.504
AGB32190.1
PFAM: Cytochrome C biogenesis protein transmembrane region.
       0.501
AGB33169.1
Hypothetical protein.
      
 0.487
ctaB
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
       0.459
AGB30216.1
Heme/copper-type cytochrome/quinol oxidase, subunit 1; PFAM: Cytochrome c oxidase subunit III; Cytochrome C and Quinol oxidase polypeptide I; Belongs to the heme-copper respiratory oxidase family.
  
  
 0.447
AGB30815.1
Heme/copper-type cytochrome/quinol oxidase, subunit 1; PFAM: Cytochrome c oxidase subunit III; Cytochrome C and Quinol oxidase polypeptide I; Belongs to the heme-copper respiratory oxidase family.
  
  
 0.447
Your Current Organism:
Natrinema pellirubrum
NCBI taxonomy Id: 797303
Other names: N. pellirubrum DSM 15624, Natrinema pellirubrum DSM 15624, Natrinema pellirubrum JCM 10476, Natrinema pellirubrum NCIMB 786, Natrinema pellirubrum str. DSM 15624, Natrinema pellirubrum strain DSM 15624
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