STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGB32268.1Hypothetical protein. (380 aa)    
Predicted Functional Partners:
AGB32270.1
PFAM: Radical SAM superfamily; TIGRFAM: radical SAM additional 4Fe4S-binding domain.
 
  
 0.872
AGB32269.1
Hypothetical protein.
 
    
0.820
hemA-2
glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).
  
    0.804
AGB32267.1
Heme/copper-type cytochrome/quinol oxidase, subunit 2; PFAM: TAT (twin-arginine translocation) pathway signal sequence; Cytochrome C oxidase subunit II, periplasmic domain; Cytochrome D1 heme domain.
 
     0.778
AGB30496.1
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component; PFAM: NMT1/THI5 like.
 
    0.717
AGB32266.1
Transposase; Manually curated.
 
     0.646
AGB31427.1
Glucose dehydrogenase; PFAM: Pyrrolo-quinoline quinone coenzyme N-terminus; PQQ enzyme repeat.
 
  
 0.633
AGB32704.1
Glucose dehydrogenase; PFAM: Pyrrolo-quinoline quinone coenzyme N-terminus; Pyrrolo-quinoline quinone coenzyme C-terminus; PQQ enzyme repeat; TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family.
 
  
 0.633
AGB33550.1
Nitric oxide reductase large subunit; PFAM: Cytochrome C and Quinol oxidase polypeptide I.
  
 
 0.565
AGB33389.1
Nitrate reductase alpha subunit; PFAM: Molybdopterin oxidoreductase.
 
  
 0.559
Your Current Organism:
Natrinema pellirubrum
NCBI taxonomy Id: 797303
Other names: N. pellirubrum DSM 15624, Natrinema pellirubrum DSM 15624, Natrinema pellirubrum JCM 10476, Natrinema pellirubrum NCIMB 786, Natrinema pellirubrum str. DSM 15624, Natrinema pellirubrum strain DSM 15624
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