STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGB32365.1PFAM: PrkA serine protein kinase C-terminal domain. (763 aa)    
Predicted Functional Partners:
AGB32363.1
PFAM: SpoVR like protein; TIGRFAM: intein N-terminal splicing region; intein C-terminal splicing region.
 
  
 0.997
AGB32364.1
PFAM: Protein of unknown function (DUF444).
 
  
 0.996
AGB32366.1
PFAM: PrkA AAA domain; PrkA serine protein kinase C-terminal domain.
 
  
0.982
AGB32367.1
Hypothetical protein.
       0.783
AGB30820.1
PFAM: Integral membrane protein DUF106.
  
    0.750
AGB32358.1
Dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein; PFAM: short chain dehydrogenase.
 
    0.744
AGB30082.1
PFAM: Integral membrane protein DUF106.
  
    0.737
AGB30921.1
Hypothetical protein.
  
     0.651
AGB32683.1
Phosphate uptake regulator; PFAM: PhoU domain; SpoVT / AbrB like domain.
  
    0.632
AGB32552.1
Hypothetical protein.
  
     0.570
Your Current Organism:
Natrinema pellirubrum
NCBI taxonomy Id: 797303
Other names: N. pellirubrum DSM 15624, Natrinema pellirubrum DSM 15624, Natrinema pellirubrum JCM 10476, Natrinema pellirubrum NCIMB 786, Natrinema pellirubrum str. DSM 15624, Natrinema pellirubrum strain DSM 15624
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.